Stem-loop fru-mir-124-2

Accession

MI0003354

Description

Fugu rubripes fru-mir-124-2 precursor miRNA

Sequence

180514 reads, 1632.0 reads per million, 12 experiments

cuggucucuccuCGUGUUCACAGCGGACCUUGAUuuaaauguccauacaauUAAGGCACGCGGUGAAUGCCAAgagag
.....(((((...((((((((.(((..((((((((.............))))))))..))).))))))))...)))))

Structure

cuggu     cuC        A   GA        uaaau 
     cucuc   GUGUUCAC GCG  CCUUGAUu     g
     |||||   |||||||| |||  ||||||||     u
     gagag   CGUAAGUG CGC  GGAAUuaa     c
-----     AAC        G   AC        cauac 

Annotation confidence High

Comments

This Fugu miRNA sequence is predicted based on homology with a verified zebrafish sequence (Mihaela Zavolan, personal communication).

Genome context

ref|NC_042300.1|: 3639016-3639093 [+]

Mature fru-miR-124-5p

• Accession: MIMAT0052810
• Description: Fugu rubripes fru-miR-124-5p mature miRNA
• Sequence: 13 - CGUGUUCACAGCGGACCUUGAU - 34
• Evidence: not_experimental

Mature fru-miR-124-3p

• Accession: MIMAT0002896
• Description: Fugu rubripes fru-miR-124-3p mature miRNA
• Sequence: 52 - UAAGGCACGCGGUGAAUGCCAA - 73
• Evidence: not_experimental

References