Stem-loop fru-mir-214

Accession

MI0003356

Description

Fugu rubripes fru-mir-214 precursor miRNA

Sequence

caggaugagacuguuguggugugucugccugucuacacuugcugugcagaccuucugcuccuguACAGCAGGCACAGACAGGCAGacagauggcagccc
............(((((.((.(((((((((((((...((((((((((((...........))))))))))))...))))))))))))).)).)))))..

Structure

caggaugagacu     g  g             aca            accu 
            guugu gu ugucugccugucu   cuugcugugcag    u
            ||||| || |||||||||||||   ||||||||||||    c
            cgacg ua acaGACGGACAGA   GGACGACAuguc    u
----------cc     g  g             CAC            cucg 

Annotation confidence Not enough data

Comments

This Fugu miRNA sequence is predicted based on homology with a verified zebrafish sequence (Mihaela Zavolan, personal communication).

Genome context

HE602554.1: 3510928-3511026 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from fru-mir-214

Mature fru-miR-214

• Accession: MIMAT0003026
• Description: Fugu rubripes fru-miR-214 mature miRNA
• Sequence: 65 - ACAGCAGGCACAGACAGGCAG - 85
• Evidence: not_experimental

References