Stem-loop tni-mir-214-1

Accession

MI0003357

Description

Tetraodon nigroviridis tni-mir-214-1 precursor miRNA

Sequence

904 reads, 33.0 reads per million, 3 experiments

guggugugucugccugucuacacuugcugugcagaccuucugcuccuguACAGCAGGCACAGACAGGCAGacagauggcagccccacu
((.((.(((((((((((((...((((((((((((...........))))))))))))...))))))))))))).)).)).........

Structure

---------  g  g             aca            accu 
         gu gu ugucugccugucu   cuugcugugcag    u
         || || |||||||||||||   ||||||||||||    c
         cg ua acaGACGGACAGA   GGACGACAuguc    u
ucaccccga  g  g             CAC            cucg 

Annotation confidence Not enough data

Comments

This Tetraodon miRNA sequence is predicted based on homology with a verified zebrafish sequence (Mihaela Zavolan, personal communication).

Genome context

1: 12449346-12449433 [+]

Mature tni-miR-214-3p

• Accession: MIMAT0003027
• Description: Tetraodon nigroviridis tni-miR-214-3p mature miRNA
• Sequence: 50 - ACAGCAGGCACAGACAGGCAG - 70
• Evidence: not_experimental

References