Accession
MI0003358
Description
Fugu rubripes
fru-mir-199-1 precursor miRNA
Sequence
uccugcuccgucauCCCAGUGUUCAGACUACCUGUUCaggauuuuacugguguacaguagucugcacauugguuagacagugcaugg
.(((((.(.(((...(((((((.((((((((.(((((((.......))))...))))))))))).)))))))...))).).))).))
.(((((.(.(((...(((((((.((((((((.(((((((.......))))...))))))))))).)))))))...))).).))).))
Structure
u - u c auC U C --- ga cc ugc c guc CCAGUGU CAGACUAC UGU UCag u || ||| | ||| ||||||| |||||||| ||| |||| u gg acg g cag gguuaca gucugaug aca gguc u - u u a auu c - ugu au
Annotation confidence
Not enough data
Do you think this miRNA is real?
Comments
This Fugu miRNA sequence is predicted based on homology with a verified zebrafish sequence (Mihaela Zavolan, personal communication).
Genome context
HE602554.1: 3508828-3508914 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from fru-mir-199-1
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature fru-miR-199
| Accession | MIMAT0002959 |
| Description | Fugu rubripes fru-miR-199 mature miRNA |
| Sequence | 15 - CCCAGUGUUCAGACUACCUGUUC - 37 |
| Evidence | not_experimental |
References
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