Accession
MI0003367
Description
Fugu rubripes
fru-mir-129-1 precursor miRNA
Sequence
1631787
reads,
15279.0
reads per million, 12 experiments
guccuucacgaauCUUUUUGCGGUCUGGGCUUGCUguucuuuacugguaaucugggAAGCCCUUACCCCAAAAAGCAUuugcggaggac
(((((((.((((((((((((.(((..((((((.(((((((.....)).)))..)).))))))..))).))))))).))))).)))))))
(((((((.((((((((((((.(((..((((((.(((((((.....)).)))..)).))))))..))).))))))).))))).)))))))
Structure
a - C CU G -- - u
guccuuc cgaau CUUUUUG GGU GGGCUU CU guu cu u
||||||| ||||| ||||||| ||| |||||| || ||| || a
caggagg guuUA GAAAAAC CCA CCCGAA gg uaa gg c
c C C UU g uc u u
Annotation confidence
High
Do you think this miRNA is real?
Comments
This Fugu miRNA sequence is predicted based on homology with a verified zebrafish sequence (Mihaela Zavolan, personal communication).
Genome context
ref|NC_042293.1|: 6180043-6180131 [-]
Database links
Mature fru-miR-129-5p
| Accession | MIMAT0003035 |
| Description | Fugu rubripes fru-miR-129-5p mature miRNA |
| Sequence | 14 - CUUUUUGCGGUCUGGGCUUGCU - 35 |
| Evidence | not_experimental |
Mature fru-miR-129-1-3p
| Accession | MIMAT0052886 |
| Description | Fugu rubripes fru-miR-129-1-3p mature miRNA |
| Sequence | 57 - AAGCCCUUACCCCAAAAAGCAU - 78 |
| Evidence | not_experimental |
References
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