Accession
MI0003368
Description
Tetraodon nigroviridis
tni-mir-129-1 precursor miRNA
Sequence
463
reads,
17.0
reads per million, 3 experiments
guccuucacgaauCUUUUUGCGGUCUGGGCUUGCUguucucugcucacccggAAGCCCUUACCCCAAAAAGCAUUugcggggggc
(((((((.((((((((((((.(((..((((((.(((.............)))))))))..))).))))))).))))).)))))))
(((((((.((((((((((((.(((..((((((.(((.............)))))))))..))).))))))).))))).)))))))
Structure
a - C CU G uucuc
guccuuc cgaau CUUUUUG GGU GGGCUU CUg u
||||||| ||||| ||||||| ||| |||||| ||| g
cgggggg guUUA GAAAAAC CCA CCCGAA ggc c
c C C UU - ccacu
Annotation confidence
High
Do you think this miRNA is real?
Comments
This Tetraodon miRNA sequence is predicted based on homology with a verified zebrafish sequence (Mihaela Zavolan, personal communication).
Genome context
13: 12882708-12882792 [+]
Database links
Mature tni-miR-129-5p
| Accession | MIMAT0003036 |
| Description | Tetraodon nigroviridis tni-miR-129-5p mature miRNA |
| Sequence | 14 - CUUUUUGCGGUCUGGGCUUGCU - 35 |
| Evidence | not_experimental |
Mature tni-miR-129-1-3p
| Accession | MIMAT0052963 |
| Description | Tetraodon nigroviridis tni-miR-129-1-3p mature miRNA |
| Sequence | 53 - AAGCCCUUACCCCAAAAAGCAUU - 75 |
| Evidence | not_experimental |
References
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