Stem-loop tni-mir-101b

Accession

MI0003372

Description

Tetraodon nigroviridis tni-mir-101b precursor miRNA

Sequence

40174 reads, 1472.0 reads per million, 3 experiments

ugaacuguccauuuUCGGUUAUCAUGGUACCGCUgcugugucccucucaagUACAGUACUAUGAUAACUGAAGauuggcagugccauc
...((((((.((((((((((((((((((((.(.((((............))))).)))))))))))))))))))).))))))......

Structure

---uga      c                    C C    guguc 
      acuguc auuuUCGGUUAUCAUGGUAC G Ugcu     c
      |||||| |||||||||||||||||||| | ||||      
      ugacgg uaGAAGUCAAUAGUAUCAUG C AUga     c
cuaccg      u                    A -    acucu 

Annotation confidence High

Comments

This Tetraodon miRNA sequence is predicted based on homology with a verified zebrafish sequence (Mihaela Zavolan, personal communication).

Genome context

4: 1028846-1028933 [+]

Mature tni-miR-101b-5p

• Accession: MIMAT0052966
• Description: Tetraodon nigroviridis tni-miR-101b-5p mature miRNA
• Sequence: 15 - UCGGUUAUCAUGGUACCGCU - 34
• Evidence: not_experimental

Mature tni-miR-101b-3p

• Accession: MIMAT0003040
• Description: Tetraodon nigroviridis tni-miR-101b-3p mature miRNA
• Sequence: 52 - UACAGUACUAUGAUAACUGAAG - 73
• Evidence: not_experimental

References