Accession
MI0003376
Description
Tetraodon nigroviridis
tni-mir-181b-2 precursor miRNA
Sequence
38190
reads,
1397.0
reads per million, 3 experiments
gcucgcaauaAACAUUCAUUGCUGUCGGUGGGuuuccauggcaauagcucgcugaccaaugaaugaagacugcgg
...((((.....(((((((((..(((((((((((...........)))))))))))))))))))).....)))).
...((((.....(((((((((..(((((((((((...........)))))))))))))))))))).....)))).
Structure
gcu auaAA CU ucca cgca CAUUCAUUG GUCGGUGGGuu u |||| ||||||||| ||||||||||| g gcgu guaaguaac cagucgcucga g --g cagaa -- uaac
Annotation confidence
Not enough data
Do you think this miRNA is real?
Comments
This Tetraodon miRNA sequence is predicted based on homology with a verified zebrafish sequence (Mihaela Zavolan, personal communication).
Genome context
Un_random: 59809209-59809283 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from tni-mir-181b-2
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature tni-miR-181b-5p
| Accession | MIMAT0003004 |
| Description | Tetraodon nigroviridis tni-miR-181b-5p mature miRNA |
| Sequence | 11 - AACAUUCAUUGCUGUCGGUGGG - 32 |
| Evidence | not_experimental |
References
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