Stem-loop tni-mir-103

Accession

MI0003378

Description

Tetraodon nigroviridis tni-mir-103 precursor miRNA

Sequence

204224 reads, 7479.0 reads per million, 3 experiments

uugcucuacgcuuuuAGCCUCUUUACAGUGCUGCCUUGcucuacucauguucaAGCAGCAUUGUACAGGGCUAUGAcagcguagag
...(((((((((..(((((.((.(((((((((((.(((..(.......)..)))))))))))))).)))))))....)))))))))

Structure

uug         --uu     U  U           C   cu ua 
   cucuacgcu    uAGCC CU UACAGUGCUGC UUG  c  c
   |||||||||    ||||| || ||||||||||| |||  |  u
   gagaugcga    AUCGG GA AUGUUACGACG Aac  g  c
---         cAGU     -  C           -   uu ua 

Annotation confidence High

Comments

This Tetraodon miRNA sequence is predicted based on homology with a verified zebrafish sequence (Mihaela Zavolan, personal communication).

Genome context

1: 5372728-5372813 [-]

Mature tni-miR-103-5p

• Accession: MIMAT0052967
• Description: Tetraodon nigroviridis tni-miR-103-5p mature miRNA
• Sequence: 16 - AGCCUCUUUACAGUGCUGCCUUG - 38
• Evidence: not_experimental

Mature tni-miR-103-3p

• Accession: MIMAT0003042
• Description: Tetraodon nigroviridis tni-miR-103-3p mature miRNA
• Sequence: 54 - AGCAGCAUUGUACAGGGCUAUGA - 76
• Evidence: not_experimental

References