Stem-loop fru-mir-135a

Accession

MI0003388

Description

Fugu rubripes fru-mir-135a precursor miRNA

Sequence

148608 reads, 1362.0 reads per million, 12 experiments

ugcuguguuuUAUGGCUUUCUAUUCCUAUGUGauuuucucuagcaugucacauagggucuaaagccauuggguacagag
..((((((((.((((((((....(((((((((((............)))))))))))...)))))))).))))))))..

Structure

ug        U        CUAU           uuucu 
  cuguguuu AUGGCUUU    UCCUAUGUGau     c
  |||||||| ||||||||    |||||||||||      
  gacauggg uaccgaaa    gggauacacug     u
ga        u        -ucu           uacga 

Annotation confidence Not enough data

Comments

This Fugu miRNA sequence is predicted based on homology with a verified zebrafish sequence (Mihaela Zavolan, personal communication).

Genome context

ref|NC_042303.1|: 18200588-18200666 [-]

Mature fru-miR-135a-5p

• Accession: MIMAT0003051
• Description: Fugu rubripes fru-miR-135a-5p mature miRNA
• Sequence: 11 - UAUGGCUUUCUAUUCCUAUGUG - 32
• Evidence: not_experimental

References