Accession
MI0003395
Description
Fugu rubripes
fru-mir-29b-2 precursor miRNA
Sequence
10443
reads,
102.0
reads per million, 12 experiments
uggaaGCUGGUUUCAGGUGGUGGCUUAGAguauugucaucuaucUAGCACCAUUUGAAAUCAGUGUUcuugggg
.(((((((((((((((((((((.((((((.........))))...))))))))))))))))))).)))).....
.(((((((((((((((((((((.((((((.........))))...))))))))))))))))))).)))).....
Structure
----u - G --- gua
ggaa GCUGGUUUCAGGUGGUG CU UAGA u
|||| ||||||||||||||||| || |||| u
ucUU UGACUAAAGUUUACCAC GA aucu g
ggggu G - Ucu acu
Annotation confidence
High
Do you think this miRNA is real?
Comments
This Fugu miRNA sequence is predicted based on homology with a verified zebrafish sequence (Mihaela Zavolan, personal communication).
Genome context
ref|NC_042287.1|: 16127623-16127696 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from fru-mir-29b-2
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature fru-miR-29b-2-5p
| Accession | MIMAT0052896 |
| Description | Fugu rubripes fru-miR-29b-2-5p mature miRNA |
| Sequence | 6 - GCUGGUUUCAGGUGGUGGCUUAGA - 29 |
| Evidence | not_experimental |
Mature fru-miR-29b-3p
| Accession | MIMAT0003055 |
| Description | Fugu rubripes fru-miR-29b-3p mature miRNA |
| Sequence | 45 - UAGCACCAUUUGAAAUCAGUGUU - 67 |
| Evidence | not_experimental |
References
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