Accession
MI0003417
Description
Fugu rubripes
fru-mir-27e precursor miRNA
Sequence
cacuugcuaaaggcaccgagcuuagcuaauuggugagcauugaucccugcuauguguugUUCACAGUGGCUAAGUUCAGUGccugaggugaaauaguuga
...(((((..((((((.(((((((((((....(((((((..................)))))))..))))))))))).))))))..))))).........
...(((((..((((((.(((((((((((....(((((((..................)))))))..))))))))))).))))))..))))).........
Structure
------cac aa c auug uugauccc
uugcu aggcac gagcuuagcua gugagca u
||||| |||||| ||||||||||| |||||||
agugg uccGUG CUUGAAUCGGU CACUUgu g
aguugauaa ag A --GA uguguauc
Annotation confidence
Not enough data
Do you think this miRNA is real?
Comments
This Fugu miRNA sequence is predicted based on homology with a verified zebrafish sequence (Mihaela Zavolan, personal communication).
Genome context
HE602554.1: 7364007-7364106 [+]
Clustered miRNAs
2 other miRNAs are < 10 kb from fru-mir-27e
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature fru-miR-27e
| Accession | MIMAT0003067 |
| Description | Fugu rubripes fru-miR-27e mature miRNA |
| Sequence | 60 - UUCACAGUGGCUAAGUUCAGUG - 81 |
| Evidence | not_experimental |
References
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