Accession
MI0003418
Description
Tetraodon nigroviridis
tni-mir-27e precursor miRNA
Sequence
1753
reads,
64.0
reads per million, 3 experiments
cucuugcugaaggcacagagcuuagcuaauuggugagcauugaucccugcuauguguugUUCACAGUGGCUAAGUUCAGUGcc
...........(((((.(((((((((((....(((((((..................)))))))..))))))))))).)))))
...........(((((.(((((((((((....(((((((..................)))))))..))))))))))).)))))
Structure
cucuugcugaa a auug uugauccc
ggcac gagcuuagcua gugagca u
||||| ||||||||||| |||||||
ccGUG CUUGAAUCGGU CACUUgu g
----------- A --GA uguguauc
Annotation confidence
Not enough data
Do you think this miRNA is real?
Comments
This Tetraodon miRNA sequence is predicted based on homology with a verified zebrafish sequence (Mihaela Zavolan, personal communication).
Genome context
1: 16059174-16059256 [+]
Clustered miRNAs
2 other miRNAs are < 10 kb from tni-mir-27e
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature tni-miR-27e-3p
| Accession | MIMAT0003068 |
| Description | Tetraodon nigroviridis tni-miR-27e-3p mature miRNA |
| Sequence | 60 - UUCACAGUGGCUAAGUUCAGUG - 81 |
| Evidence | not_experimental |
References
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