Accession
MI0003420
Description
Tetraodon nigroviridis
tni-mir-375 precursor miRNA
Sequence
774
reads,
28.0
reads per million, 3 experiments
uguacuugcuucacguugagccucacgcacaauaccugaagaugaaguUUUGUUCGUUCGGCUCGCGUUAugcaggu
...((((((...((((.(((((..(((.((((.((...........)).)))).)))..)))))))))...))))))
...((((((...((((.(((((..(((.((((.((...........)).)))).)))..)))))))))...))))))
Structure
ugu uuc u uc c u cuga acuugc acgu gagcc acg acaa ac a |||||| |||| ||||| ||| |||| || g uggacg UGCG CUCGG UGC UGUU ug a --- uAU - CU U U aagu
Annotation confidence
Not enough data
Do you think this miRNA is real?
Comments
This Tetraodon miRNA sequence is predicted based on homology with a verified zebrafish sequence (Mihaela Zavolan, personal communication).
Genome context
2: 17702696-17702772 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from tni-mir-375
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature tni-miR-375-3p
| Accession | MIMAT0003070 |
| Description | Tetraodon nigroviridis tni-miR-375-3p mature miRNA |
| Sequence | 49 - UUUGUUCGUUCGGCUCGCGUUA - 70 |
| Evidence | not_experimental |
References
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