Accession
MI0003424
Description
Tetraodon nigroviridis
tni-mir-1 precursor miRNA
Sequence
auuaccuccuuaguguacauacuucuuuauguacccauaugaacauaugauaacuaUGGAAUGUAAAGAAGUAUGUAUucuuggugagguga
.(((((((((.((.((((((((((((((((((..(((((...............))))).)))))))))))))))))).)).)).)))))))
.(((((((((.((.((((((((((((((((((..(((((...............))))).)))))))))))))))))).)).)).)))))))
Structure
a - u u ac ugaaca uuaccuc cu ag guacauacuucuuuaugu ccaua u ||||||| || || |||||||||||||||||| ||||| a aguggag gg uc UAUGUAUGAAGAAAUGUA GGUau u - u u u -A caauag
Annotation confidence
Not enough data
Do you think this miRNA is real?
Comments
This Tetraodon miRNA sequence is predicted based on homology with a verified zebrafish sequence (Mihaela Zavolan, personal communication).
Genome context
15_random: 1423482-1423573 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from tni-mir-1
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature tni-miR-1
| Accession | MIMAT0003072 |
| Description | Tetraodon nigroviridis tni-miR-1 mature miRNA |
| Sequence | 57 - UGGAAUGUAAAGAAGUAUGUAU - 78 |
| Evidence | not_experimental |
References
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