miRBase entry: fru-mir-27c

Stem-loop fru-mir-27c

Accession
MI0003431
Description
Fugu rubripes fru-mir-27c precursor miRNA
Sequence

ggcuguguggcggcaggacuuaacccacaugugagcagugagugugugccaugUUCACAGUGGUUAAGUUCUGCcgcc
........(((((((((((((((((.((.((((((((.((.((....)))))))))))))))))))))))))))))))
Structure
ggcugugu                 c  a        g  a  g 
        ggcggcaggacuuaacc ac ugugagca ug gu u
        ||||||||||||||||| || |||||||| || ||  
        ccgcCGUCUUGAAUUGG UG ACACUUgu ac cg g
--------                 -  -        -  -  u
Annotation confidence Not enough data
Do you think this miRNA is real?
Comments
This Fugu miRNA sequence is predicted based on homology with a verified zebrafish sequence (Mihaela Zavolan, personal communication).
Genome context
HE602539.1: 5648764-5648841 [+]
Clustered miRNAs
2 other miRNAs are < 10 kb from fru-mir-27c
Name Accession Chromosome Start End Strand Confidence



Database links

Mature fru-miR-27c

Accession MIMAT0003077
Description Fugu rubripes fru-miR-27c mature miRNA
Sequence 54 - UUCACAGUGGUUAAGUUCUGC - 74
Evidence not_experimental

References
Comments or questions? Email mirbase@manchester.ac.uk