Accession
MI0003432
Description
Tetraodon nigroviridis
tni-mir-27c precursor miRNA
Sequence
ggcugugcggcggcaggacuuaacccacaugugaacagugagugugccgugUUCACAGUGGUUAAGUUCUGCcgcc
........(((((((((((((((((.((.((((((((..(......)..)))))))))))))))))))))))))))
........(((((((((((((((((.((.((((((((..(......)..)))))))))))))))))))))))))))
Structure
ggcugugc c a gu ag
ggcggcaggacuuaacc ac ugugaaca g u
||||||||||||||||| || |||||||| |
ccgcCGUCUUGAAUUGG UG ACACUUgu c g
-------- - - gc gu
Annotation confidence
Not enough data
Do you think this miRNA is real?
Comments
This Tetraodon miRNA sequence is predicted based on homology with a verified zebrafish sequence (Mihaela Zavolan, personal communication).
Genome context
3: 8970174-8970249 [+]
Clustered miRNAs
2 other miRNAs are < 10 kb from tni-mir-27c
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature tni-miR-27c
| Accession | MIMAT0003078 |
| Description | Tetraodon nigroviridis tni-miR-27c mature miRNA |
| Sequence | 52 - UUCACAGUGGUUAAGUUCUGC - 72 |
| Evidence | not_experimental |
References
|
|
