Stem-loop tni-mir-125a

Accession

MI0003440

Description

Tetraodon nigroviridis tni-mir-125a precursor miRNA

Sequence

420 reads, 15.0 reads per million, 3 experiments

cagugUCCCUGAGACCCUUAACCUGUGauaacgugaaaggucacaggugagguccuugggaac
.....((((.(((..(((((.((((((((..........)))))))))))))..)))))))..

Structure

cagug    U   AC     A        aacg 
     UCCC GAG  CCUUA CCUGUGau    u
     |||| |||  ||||| ||||||||     
     aggg uuc  ggagu ggacacug    g
---ca    -   cu     -        gaaa 

Annotation confidence Not enough data

Comments

This Tetraodon miRNA sequence is predicted based on homology with a verified zebrafish sequence (Mihaela Zavolan, personal communication).

Genome context

21_random: 1797970-1798032 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from tni-mir-125a

Mature tni-miR-125a-5p

• Accession: MIMAT0003082
• Description: Tetraodon nigroviridis tni-miR-125a-5p mature miRNA
• Sequence: 6 - UCCCUGAGACCCUUAACCUGUG - 27
• Evidence: not_experimental

References