miRBase entry: fru-mir-183

Stem-loop fru-mir-183

Accession

MI0003453

Description

Fugu rubripes fru-mir-183 precursor miRNA

Sequence

cugugUAUGGCACUGGUAGAAUUCACUGugagagcucacuaucagugaauuaccauagggccauaaacag
((((.((((((..(((((..((((((((..((......))..)))))))))))))....)))))).))))

Structure

    g      --AC     GA        ug  ag 
cugu UAUGGC    UGGUA  AUUCACUG  ag  c
|||| ||||||    |||||  ||||||||  ||   
gaca auaccg    accau  uaagugac  uc  u
    a      ggau     --        ua  ac

Annotation confidence Not enough data

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Comments

This Fugu miRNA sequence is predicted based on homology with a verified zebrafish sequence (Mihaela Zavolan, personal communication).

Genome context

HE602552.1: 5208013-5208082 [-]

Clustered miRNAs

2 other miRNAs are < 10 kb from fru-mir-183

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature fru-miR-183

Accession	MIMAT0003089
Description	Fugu rubripes fru-miR-183 mature miRNA
Sequence	6 - UAUGGCACUGGUAGAAUUCACUG - 28
Evidence	not_experimental

Stem-loop fru-mir-183

Mature fru-miR-183

References