Stem-loop fru-mir-210

Accession

MI0003459

Description

Fugu rubripes fru-mir-210 precursor miRNA

Sequence

71522 reads, 972.0 reads per million, 12 experiments

ucuaaaagcaggugAGCCACUGACUAACGCACAUUGcgccaguugacaguuccaCUGUGCGUGUGACAGCGGCUAAccugguuuugggaacgcuucug
(((((((.(((((.((((.(((.(..(((((((.((.((.........))..)).)))))))..).))).)))).))))).)))))))..........

Structure

----------       g     g    A   A UA       U  -c  cag 
          ucuaaaa caggu AGCC CUG C  ACGCACA UG  gc   u
          ||||||| ||||| |||| ||| |  ||||||| ||  ||   u
          ggguuuu guccA UCGG GAC G  UGCGUGU ac  ug   g
gucuucgcaa       g     A    C   A UG       C  cu  aca 

Annotation confidence High

Comments

This Fugu miRNA sequence is predicted based on homology with a verified zebrafish sequence (Mihaela Zavolan, personal communication).

Genome context

ref|NC_042293.1|: 8194714-8194811 [+]

Mature fru-miR-210-5p

• Accession: MIMAT0052916
• Description: Fugu rubripes fru-miR-210-5p mature miRNA
• Sequence: 15 - AGCCACUGACUAACGCACAUUG - 36
• Evidence: not_experimental

Mature fru-miR-210-3p

• Accession: MIMAT0003095
• Description: Fugu rubripes fru-miR-210-3p mature miRNA
• Sequence: 55 - CUGUGCGUGUGACAGCGGCUAA - 76
• Evidence: not_experimental

References