Stem-loop tni-mir-210

Accession

MI0003460

Description

Tetraodon nigroviridis tni-mir-210 precursor miRNA

Sequence

6634 reads, 243.0 reads per million, 3 experiments

caggugAGCCACUGACUAACGCACAUUGUgccaguugacaguuccaCUGUGCGUGUGACAGCGGCUAAccugguuuugggga
(((((.((((.(((.(..(((((((((((........))))......)))))))..).))).)))).)))))..........

Structure

----------     g    A   A UA       ------    gcc 
          caggu AGCC CUG C  ACGCACA      UUGU   a
          ||||| |||| ||| |  |||||||      ||||    
          guccA UCGG GAC G  UGCGUGU      gaca   g
agggguuuug     A    C   A UG       Caccuu    guu 

Annotation confidence High

Comments

This Tetraodon miRNA sequence is predicted based on homology with a verified zebrafish sequence (Mihaela Zavolan, personal communication).

Genome context

13: 6095025-6095106 [+]

Mature tni-miR-210-5p

• Accession: MIMAT0052984
• Description: Tetraodon nigroviridis tni-miR-210-5p mature miRNA
• Sequence: 7 - AGCCACUGACUAACGCACAUUGU - 29
• Evidence: not_experimental

Mature tni-miR-210-3p

• Accession: MIMAT0003096
• Description: Tetraodon nigroviridis tni-miR-210-3p mature miRNA
• Sequence: 47 - CUGUGCGUGUGACAGCGGCUAA - 68
• Evidence: not_experimental

References