Stem-loop fru-let-7g

Accession

MI0003461

Description

Fugu rubripes fru-let-7g precursor miRNA

Literature search

2 open access papers mention fru-let-7g
(2 sentences)

Sequence

5148267 reads, 47209.0 reads per million, 12 experiments

ugggaUGAGGUAGUAGUUUGUAUAGUUuuaggaucacaccagaucugggagauaaCUAUACAGUCUACUGUCUUUCcca
(((((.((((((((((.((((((((((...(((((......))))).......)))))))))).)))))))))))))))

Structure

     U          U          ----uua     ac 
uggga GAGGUAGUAG UUGUAUAGUU       ggauc  a
||||| |||||||||| ||||||||||       |||||   
accCU UUCUGUCAUC GACAUAUCaa       ucuag  c
     -          U          uagaggg     ac 

Annotation confidence High

Comments

This Fugu miRNA sequence is predicted based on homology with a verified zebrafish sequence (Mihaela Zavolan, personal communication).

Genome context

ref|NC_042287.1|: 9703383-9703461 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from fru-let-7g

Mature fru-let-7g-5p

• Accession: MIMAT0003097
• Description: Fugu rubripes fru-let-7g-5p mature miRNA
• Sequence: 6 - UGAGGUAGUAGUUUGUAUAGUU - 27
• Evidence: not_experimental

Mature fru-let-7g-3p

• Accession: MIMAT0052917
• Description: Fugu rubripes fru-let-7g-3p mature miRNA
• Sequence: 56 - CUAUACAGUCUACUGUCUUUC - 76
• Evidence: not_experimental

References