Stem-loop fru-mir-190

Accession

MI0003473

Description

Fugu rubripes fru-mir-190 precursor miRNA

Sequence

4275 reads, 48.0 reads per million, 12 experiments

cugucUGAUAUGUUUGAUAUAUUAGGUuguuauucaguccaACUAUAUAUCAAACAUAUUCCUacag
((((..((((((((((((((((..(((((..........)))))))))))))))))))))...))))

Structure

    -cU                UA     uuau 
cugu   GAUAUGUUUGAUAUAU  GGUug    u
||||   ||||||||||||||||  |||||     
gaca   UUAUACAAACUAUAUA  UCAac    c
    UCC                --     cuga 

Annotation confidence High

Comments

This Fugu miRNA sequence is predicted based on homology with a verified zebrafish sequence (Mihaela Zavolan, personal communication).

Genome context

ref|NC_042293.1|: 9572278-9572344 [-]

Mature fru-miR-190-5p

• Accession: MIMAT0003109
• Description: Fugu rubripes fru-miR-190-5p mature miRNA
• Sequence: 6 - UGAUAUGUUUGAUAUAUUAGGU - 27
• Evidence: not_experimental

Mature fru-miR-190-3p

• Accession: MIMAT0052923
• Description: Fugu rubripes fru-miR-190-3p mature miRNA
• Sequence: 42 - ACUAUAUAUCAAACAUAUUCCU - 63
• Evidence: not_experimental

References