Stem-loop fru-mir-181a-2

Accession

MI0003475

Description

Fugu rubripes fru-mir-181a-2 precursor miRNA

Sequence

2539864 reads, 31305.0 reads per million, 12 experiments

gacuuugucaagucuuuggggAACAUUCAACGCUGUCGGUGAGUuuugucuccgaaaaACCAUCGACUGUUGAGUGUACCcugacacuugagcuccc
.......((((((..((((((.((((((((((..(((((((.(((((........)))))))))))))))))))))).)))))).))))))......

Structure

gacuuug      cu      A          CU       A     guc 
       ucaagu  uugggg ACAUUCAACG  GUCGGUG GUuuu   u
       ||||||  |||||| ||||||||||  ||||||| |||||    
       aguuca  agucCC UGUGAGUUGU  CAGCUAC CAaaa   c
-cccucg      -c      A          --       -     agc 

Annotation confidence High

Comments

This Fugu miRNA sequence is predicted based on homology with a verified mammalian sequence (Mihaela Zavolan, personal communication).

Genome context

ref|NC_042289.1|: 2745324-2745420 [+]

Mature fru-miR-181a-5p

• Accession: MIMAT0003111
• Description: Fugu rubripes fru-miR-181a-5p mature miRNA
• Sequence: 22 - AACAUUCAACGCUGUCGGUGAGU - 44
• Evidence: not_experimental

Mature fru-miR-181a-2-3p

• Accession: MIMAT0052871
• Description: Fugu rubripes fru-miR-181a-2-3p mature miRNA
• Sequence: 59 - ACCAUCGACUGUUGAGUGUACC - 80
• Evidence: not_experimental

References