Accession
MI0003499
Description
Physcomitrella patens
ppt-MIR319d precursor miRNA
Literature search
4 open access papers mention ppt-MIR319d
(15 sentences)
(15 sentences)
Sequence
1235368
reads,
49373.0
reads per million, 10 experiments
cagcguggagcuuucuucgguccaauagUGGCUGAGUCGAAGGUUGUGCUgcugccgacucaaacuuccggcuucccuauccaaccccugguauggaauccgaaugucugauacgggagcuguUCAAUCUCCGGCUUAGCAUCUCuuggacugaagggagcuccccgcug
(((((.(((((((((((((((((((.((..(((((((((.((((((.((.(((.(((..(((.((...(((.((((.((.(((.....))))).)))).)))...)).)))..))).))).)).)))))).)))))))))..)).))))))))))))))))))).)))))
(((((.(((((((((((((((((((.((..(((((((((.((((((.((.(((.(((..(((.((...(((.((((.((.(((.....))))).)))).)))...)).)))..))).))).)).)))))).)))))))))..)).))))))))))))))))))).)))))
Structure
u u UG A U U g ac a uuc c c u a
cagcg ggagcuuucuucgguccaa ag GCUGAGUCG AGGUUG GC gcu ccg uca ac cgg uucc ua cca c
||||| ||||||||||||||||||| || ||||||||| |||||| || ||| ||| ||| || ||| |||| || ||| c
gucgc ccucgagggaagucagguu UC CGAUUCGGC UCUAAC ug cga ggc agu ug gcc aagg au ggu c
c C UA C U u g au c uaa u u - c
Annotation confidence
High
Do you think this miRNA is real?
Genome context
Chr22: 1912128-1912297 [+]
Database links
Mature ppt-miR319d-5p
| Accession | MIMAT0004326 |
| Description | Physcomitrella patens ppt-miR319d-5p mature miRNA |
| Sequence | 29 - UGGCUGAGUCGAAGGUUGUGCU - 50 |
| Evidence |
experimental
cloned [2] |
Mature ppt-miR319d-3p
| Accession | MIMAT0003136 |
| Description | Physcomitrella patens ppt-miR319d-3p mature miRNA |
| Sequence | 124 - UCAAUCUCCGGCUUAGCAUCUC - 145 |
| Evidence |
experimental
cloned [1], 454 [3] |
References
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