Stem-loop hsa-mir-564

Accession

MI0003570

Symbol

HGNC: MIR564

Description

Homo sapiens hsa-mir-564 precursor miRNA

Literature search

10 open access papers mention hsa-mir-564
(85 sentences)

Sequence

14 reads, 7 reads per million, 8 experiments

cgggcagcgggugccAGGCACGGUGUCAGCAGGCaacauggccgagaggccggggccuccgggcggcgccguguccgcgaccgcguacccugac
.(((..((((..((..(((((((((((.((((((....(((((....)))))..))))....))))))))))))).))..))))...)))....

Structure

---c   -ca    gu  cA           A  ----    aaca     g 
    ggg   gcgg  gc  GGCACGGUGUC GC    AGGC    uggcc a
    |||   ||||  ||  ||||||||||| ||    ||||    |||||  
    ccc   cgcc  cg  cugugccgcgg cg    uccg    gccgg g
cagu   aug    ag  -c           -  ggcc    --gg     a 

Annotation confidence Not enough data

Genome context

chr3: 44861888-44861981 [+]

Disease association

hsa-mir-564 is associated with one or more human diseases in the Human microRNA Disease Database

Mature hsa-miR-564

• Accession: MIMAT0003228
• Description: Homo sapiens hsa-miR-564 mature miRNA
• Sequence: 16 - AGGCACGGUGUCAGCAGGC - 34
• Evidence: experimental ; RT-PCR [1], SAGE [1]

References

1. PubMed ID: 16505370
   The colorectal microRNAome
   "Cummins JM, He Y, Leary RJ, Pagliarini R, Diaz LA Jr, Sjoblom T, Barad O, Bentwich Z, Szafranska AE, Labourier E, Raymond CK, Roberts BS, Juhl H, Kinzler KW, Vogelstein B, Velculescu VE"
   "Proc Natl Acad Sci U S A (2006) 103:3687-3692