Accession
MI0003600
Symbol
HGNC:
MIR550A1
Description
Homo sapiens
hsa-mir-550a-1 precursor miRNA mir-550
Gene
family?
family?
RF00873;
mir-550
Literature search
18 open access papers mention hsa-mir-550a-1
(116 sentences)
(116 sentences)
Sequence
6720
reads,
41
reads per million, 123 experiments
ugaugcuuugcuggcuggugcAGUGCCUGAGGGAGUAAGAGCCCuguuguuguaagauagUGUCUUACUCCCUCAGGCACAUcuccaacaagucucu
.((.((((.(.(((..(((...((((((((((((((((((.(.(((((.......))))).)))))))))))))))))))))).))).))))).)).
.((.((((.(.(((..(((...((((((((((((((((((.(.(((((.......))))).)))))))))))))))))))))).))).))))).)).
Structure
u u u c cu gcA G C gu ga gcuu g ugg ggu GUGCCUGAGGGAGUAAGA C Cuguu u || |||| | ||| ||| |||||||||||||||||| | ||||| g cu ugaa c acc cUA CACGGACUCCCUCAUUCU G gauag u u c - a -u --- - U aa
Annotation confidence
Medium
Do you think this miRNA is real?
Genome context
chr7: 30289794-30289890 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from hsa-mir-550a-1
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Disease association
hsa-mir-550a-1 is associated with one or more human diseases in the Human microRNA Disease Database
| Disease | Description | Category | PubMed ID |
|---|
Database links
Mature hsa-miR-550a-5p
| Accession | MIMAT0004800 |
| Description | Homo sapiens hsa-miR-550a-5p mature miRNA |
| Sequence | 22 - AGUGCCUGAGGGAGUAAGAGCCC - 44 |
| Evidence |
experimental
cloned [2] |
| Database links |
|
| Predicted targets |
|
Mature hsa-miR-550a-3p
| Accession | MIMAT0003257 |
| Description | Homo sapiens hsa-miR-550a-3p mature miRNA |
| Sequence | 61 - UGUCUUACUCCCUCAGGCACAU - 82 |
| Evidence |
experimental
RAKE [1], Illumina [2] |
| Database links |
|
| Predicted targets |
|
References
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