Stem-loop hsa-mir-548a-3

Accession

MI0003612

Symbol

HGNC: MIR548A3

Description

Homo sapiens hsa-mir-548a-3 precursor miRNA

Literature search

56 open access papers mention hsa-mir-548a-3
(170 sentences)

Sequence

6532 reads, 42 reads per million, 69 experiments

ccuagaauguuauuaggucggugcAAAAGUAAUUGCGAGUUUUACCauuacuuucaauggCAAAACUGGCAAUUACUUUUGCaccaacguaauacuu
..........(((((.((.(((((((((((((((((.((((((.(((((......))))).)))))).))))))))))))))))).)).)))))...

Structure

ccuagaaugu     g  c                 G      A     ac 
          uauua gu ggugcAAAAGUAAUUGC AGUUUU CCauu  u
          ||||| || ||||||||||||||||| |||||| |||||   
          auaau ca ccaCGUUUUCAUUAACG UCAAAA gguaa  u
-------uuc     g  a                 G      C     cu 

Annotation confidence Medium

Genome context

chr8: 104484369-104484465 [-]

Disease association

hsa-mir-548a-3 is associated with one or more human diseases in the Human microRNA Disease Database

Mature hsa-miR-548a-3p

• Accession: MIMAT0003251
• Description: Homo sapiens hsa-miR-548a-3p mature miRNA
• Sequence: 61 - CAAAACUGGCAAUUACUUUUGC - 82
• Evidence: experimental ; SAGE [1], cloned [2]

Mature hsa-miR-548a-5p

• Accession: MIMAT0004803
• Description: Homo sapiens hsa-miR-548a-5p mature miRNA
• Sequence: 25 - AAAAGUAAUUGCGAGUUUUACC - 46
• Evidence: experimental ; cloned [2]

References

1. PubMed ID: 17604727
   A mammalian microRNA expression atlas based on small RNA library sequencing
   "Landgraf P, Rusu M, Sheridan R, Sewer A, Iovino N, Aravin A, Pfeffer S, Rice A, Kamphorst AO, Landthaler M, Lin C, Socci ND, Hermida L, Fulci V, Chiaretti S, Foa R, Schliwka J, Fuchs U, Novosel A, Muller RU, Schermer B, Bissels U, Inman J, Phan Q, Chien M"
   "Cell (2007) 129:1401-1414


2. PubMed ID: 16505370
   The colorectal microRNAome
   "Cummins JM, He Y, Leary RJ, Pagliarini R, Diaz LA Jr, Sjoblom T, Barad O, Bentwich Z, Szafranska AE, Labourier E, Raymond CK, Roberts BS, Juhl H, Kinzler KW, Vogelstein B, Velculescu VE"
   "Proc Natl Acad Sci U S A (2006) 103:3687-3692