Stem-loop hsa-mir-549a

Accession

MI0003679

Symbol

HGNC: MIR549A

Description

Homo sapiens hsa-mir-549a precursor miRNA mir-549

Gene
family

RF00965; mir-549

Literature search

3 open access papers mention hsa-mir-549a
(6 sentences)

Sequence

286 reads, 48 reads per million, 40 experiments

agacaugcaacucaagaauauauugagAGCUCAUCCAUAGUUGUCACUGucucaaaucagUGACAACUAUGGAUGAGCUCUuaauauaucccaggc
.................((((((((((((((((((((((((((((((((........)))))))))))))))))))))))))))))))).......

Structure

agacaugcaacucaaga                                ucu 
                 auauauugagAGCUCAUCCAUAGUUGUCACUG   c
                 ||||||||||||||||||||||||||||||||    
                 uauauaauUCUCGAGUAGGUAUCAACAGUgac   a
----------cggaccc                                uaa 

Annotation confidence Not enough data

Genome context

chr15: 80841978-80842073 [-]

Disease association

hsa-mir-549a is associated with one or more human diseases in the Human microRNA Disease Database

Mature hsa-miR-549a-3p

• Accession: MIMAT0003333
• Description: Homo sapiens hsa-miR-549a-3p mature miRNA
• Sequence: 61 - UGACAACUAUGGAUGAGCUCU - 81
• Evidence: experimental ; SAGE [1]

Mature hsa-miR-549a-5p

• Accession: MIMAT0037328
• Description: Homo sapiens hsa-miR-549a-5p mature miRNA
• Sequence: 28 - AGCUCAUCCAUAGUUGUCACUG - 49
• Evidence: experimental ; Illumina [2]

References

1. PubMed ID: 16505370
   The colorectal microRNAome
   "Cummins JM, He Y, Leary RJ, Pagliarini R, Diaz LA Jr, Sjoblom T, Barad O, Bentwich Z, Szafranska AE, Labourier E, Raymond CK, Roberts BS, Juhl H, Kinzler KW, Vogelstein B, Velculescu VE"
   "Proc Natl Acad Sci U S A (2006) 103:3687-3692


2. PubMed ID: 25822230
   Selective microRNA-Offset RNA expression in human embryonic stem cells
   Asikainen S, Heikkinen L, Juhila J, Holm F, Weltner J, Trokovic R, Mikkola M, Toivonen S, Balboa D, Lampela R, Icay K, Tuuri T, Otonkoski T, Wong G, Hovatta O
   PLoS One (2015) 10:e0116668