miRBase entry: hsa-mir-660

Stem-loop hsa-mir-660


Accession
MI0003684
Symbol
HGNC: MIR660
Description
Homo sapiens hsa-mir-660 precursor miRNA mir-660
Gene
family?
RF04285; mir-660

Literature search
22 open access papers mention hsa-mir-660
(65 sentences)

Sequence

42469 reads, 550 reads per million, 122 experiments
cugcuccuucucccaUACCCAUUGCAUAUCGGAGUUGugaauucucaaaacACCUCCUGUGUGCAUGGAUUAcaggagggugagccuugucaucgug
..((((.((((((.....((((.((((((.((((.(((...........))).)))).))))))))))......)))))).))))............

Structure
----------cu    c      -caUAC    U      C    U   gaau 
            gcuc uucucc      CCAU GCAUAU GGAG UGu    u
            |||| ||||||      |||| |||||| |||| |||    c
            cgag gggagg      GGUA CGUGUG CCUC Aca    u
gugcuacuguuc    u      acAUUA    -      U    C   aaac 


Annotation confidence High
Do you think this miRNA is real?

Genome context
chrX: 50013241-50013337 [+]
Clustered miRNAs
6 other miRNAs are < 10 kb from hsa-mir-660
Name Accession Chromosome Start End Strand Confidence




Disease association
hsa-mir-660 is associated with one or more human diseases in the Human microRNA Disease Database
Disease Description Category PubMed ID


Database links

Mature hsa-miR-660-5p

Accession MIMAT0003338
Description Homo sapiens hsa-miR-660-5p mature miRNA
Sequence 16 - UACCCAUUGCAUAUCGGAGUUG - 37
Evidence experimental
Microarray [1], RT-PCR [1], SAGE [1], cloned [2]
Database links
Predicted targets

Mature hsa-miR-660-3p

Accession MIMAT0022711
Description Homo sapiens hsa-miR-660-3p mature miRNA
Sequence 52 - ACCUCCUGUGUGCAUGGAUUA - 72
Evidence not_experimental
Database links
Predicted targets

References

  1. PubMed ID: 17604727
    A mammalian microRNA expression atlas based on small RNA library sequencing
    "Landgraf P, Rusu M, Sheridan R, Sewer A, Iovino N, Aravin A, Pfeffer S, Rice A, Kamphorst AO, Landthaler M, Lin C, Socci ND, Hermida L, Fulci V, Chiaretti S, Foa R, Schliwka J, Fuchs U, Novosel A, Muller RU, Schermer B, Bissels U, Inman J, Phan Q, Chien M"
    "Cell (2007) 129:1401-1414

  2. PubMed ID: 16505370
    The colorectal microRNAome
    "Cummins JM, He Y, Leary RJ, Pagliarini R, Diaz LA Jr, Sjoblom T, Barad O, Bentwich Z, Szafranska AE, Labourier E, Raymond CK, Roberts BS, Juhl H, Kinzler KW, Vogelstein B, Velculescu VE"
    "Proc Natl Acad Sci U S A (2006) 103:3687-3692