Stem-loop dre-mir-135a

Accession

MI0003692

Description

Danio rerio dre-mir-135a precursor miRNA

Literature search

15 open access papers mention dre-mir-135a
(22 sentences)

Sequence

22554 reads, 70.0 reads per million, 254 experiments

acagcugucgugucuUAUGGCUUUUUAUUCCUAUGUGAaggugaacaaggcucAUGUAGGGAUACAAGCCACUAAacacgcagucagaaaucagcuuu
...((((.(((((.(((((((((..(((((((((((((.(.(......).)))))))))))))).)))))).))))))))))))..............

Structure

-----------aca    u     c   -      UU             a g ga 
              gcug cgugu uUA UGGCUU  UAUUCCUAUGUGA g u  a
              |||| ||||| ||| ||||||  ||||||||||||| | |   
              ugac gcaca AAU ACCGAA  AUAGGGAUGUAcu c g  c
uuucgacuaaagac    -     -   C      -C             - g aa 

Annotation confidence High

Genome context

chr25: 31044110-31044207 [-]

Mature dre-miR-135a-5p

• Accession: MIMAT0003348
• Description: Danio rerio dre-miR-135a-5p mature miRNA
• Sequence: 16 - UAUGGCUUUUUAUUCCUAUGUGA - 38
• Evidence: experimental ; array [1]

Mature dre-miR-135a-3p

• Accession: MIMAT0052786
• Description: Danio rerio dre-miR-135a-3p mature miRNA
• Sequence: 54 - AUGUAGGGAUACAAGCCACUAA - 75
• Evidence: experimental ; array [1]

References

1. PubMed ID: 15919954
   MicroRNA expression in zebrafish embryonic development
   "Wienholds E, Kloosterman WP, Miska E, Alvarez-Saavedra E, Berezikov E, de Bruijn E, Horvitz HR, Kauppinen S, Plasterk RH"
   "Science (2005) 309:310-311