Stem-loop dre-mir-139

Accession

MI0003693

Description

Danio rerio dre-mir-139 precursor miRNA mir-139

Gene
family

RF00703; mir-139

Sequence

1793 reads, 164 reads per million, 10 experiments

cuguauUCUACAGUGCAUGUGUCUccaguguuucuauggcgacUGGGGAGGCAGCGCUGUUGGAAUaac
...(((((((((((((.(((.(((((((((((.....))).)))))))).))))))))).)))))))..

Structure

cug       -      A   G        -   u 
   uauUCUA CAGUGC UGU UCUccagu guu c
   ||||||| |||||| ||| |||||||| ||| u
   aUAAGGU GUCGCG ACG AGGGGUca cgg a
-ca       U      -   G        g   u 

Annotation confidence High

Genome context

Unknown

Mature dre-miR-139-5p

• Accession: MIMAT0003349
• Description: Danio rerio dre-miR-139-5p mature miRNA
• Sequence: 7 - UCUACAGUGCAUGUGUCU - 24
• Evidence: experimental ; in-situ [1]

Mature dre-miR-139-3p

• Accession: MIMAT0032008
• Description: Danio rerio dre-miR-139-3p mature miRNA
• Sequence: 44 - UGGGGAGGCAGCGCUGUUGGAAU - 66
• Evidence: not_experimental

References

1. PubMed ID: 15919954
   MicroRNA expression in zebrafish embryonic development
   "Wienholds E, Kloosterman WP, Miska E, Alvarez-Saavedra E, Berezikov E, de Bruijn E, Horvitz HR, Kauppinen S, Plasterk RH"
   "Science (2005) 309:310-311