Stem-loop gga-mir-455

Accession

MI0003707

Description

Gallus gallus gga-mir-455 precursor miRNA mir-455

Gene
family

RF00709; mir-455

Literature search

13 open access papers mention gga-mir-455
(24 sentences)

Sequence

295580 reads, 200.0 reads per million, 256 experiments

ucccuggugugagggUAUGUGCCCUUGGACUACAUCGUggaagccagcaccAUGCAGUCCAUGGGCAUAUACACUugccucaaggu
.((.(((.(((((.((((((((((.((((((.(((.(((........))).))).)))))).)))))))))).))))).))).)).

Structure

u  c   u     g          U      A   C   gaa 
 cc ugg gugag gUAUGUGCCC UGGACU CAU GUg   g
 || ||| ||||| |||||||||| |||||| ||| |||    
 gg acu cguUC CAUAUACGGG ACCUGA GUA cac   c
u  a   c     A          U      C   c   gac 

Annotation confidence High

Genome context

17: 5377592-5377677 [+]

Mature gga-miR-455-5p

• Accession: MIMAT0003364
• Description: Gallus gallus gga-miR-455-5p mature miRNA
• Sequence: 16 - UAUGUGCCCUUGGACUACAUCGU - 38
• Evidence: not_experimental

Mature gga-miR-455-3p

• Accession: MIMAT0006788
• Description: Gallus gallus gga-miR-455-3p mature miRNA
• Sequence: 52 - AUGCAGUCCAUGGGCAUAUACACU - 75
• Evidence: experimental ; cloned [1]

References

1. PubMed ID: 18511220
   Identification of novel chicken microRNAs and analysis of their genomic organization
   "Shao P, Zhou H, Xiao ZD, He JH, Huang MB, Chen YQ, Qu LH"
   "Gene (2008) 418:34-40