Stem-loop gga-mir-489

Accession

MI0003708

Description

Gallus gallus gga-mir-489 precursor miRNA mir-489

Gene
family

RF00698; mir-489

Literature search

2 open access papers mention gga-mir-489
(3 sentences)

Sequence

2306 reads, 25 reads per million, 5 experiments

gugguggcuuggUGGUCGUAUGUAUGACGUCAUUuacuuggacuuuuaggAGUGACAUCAUAUGUACGGCUGCuaaacugcugc
(((((((.(((((((((((((((((((.((((((..(((((....))))))))))).))))))))))))))))))).)))))))

Structure

       c                   C      ua     a 
guggugg uuggUGGUCGUAUGUAUGA GUCAUU  cuugg c
||||||| ||||||||||||||||||| ||||||  |||||  
cgucguc aauCGUCGGCAUGUAUACU CAGUGA  ggauu u
       a                   A      --     u 

Annotation confidence Medium

Genome context

chr2: 23147300-23147383 [-]

Mature gga-miR-489-3p

• Accession: MIMAT0003365
• Description: Gallus gallus gga-miR-489-3p mature miRNA
• Sequence: 51 - AGUGACAUCAUAUGUACGGCUGC - 73
• Evidence: experimental ; Illumina [1]

Mature gga-miR-489-5p

• Accession: MIMAT0026632
• Description: Gallus gallus gga-miR-489-5p mature miRNA
• Sequence: 13 - UGGUCGUAUGUAUGACGUCAUU - 34
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23034410
   Birth and expression evolution of mammalian microRNA genes
   "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
   "Genome Res (2013) 23:34-45