Stem-loop hsa-mir-1296

Accession

MI0003780

Symbol

HGNC: MIR1296

Description

Homo sapiens hsa-mir-1296 precursor miRNA mir-1296

Gene
family

RF01921; mir-1296

Literature search

13 open access papers mention hsa-mir-1296
(259 sentences)

Sequence

9293 reads, 34 reads per million, 124 experiments

accuaccuaacugggUUAGGGCCCUGGCUCCAUCUCCuuuaggaaaaccuucugugggGAGUGGGGCUUCGACCCUAACCcaggugggcugu
.(((((((....(((((((((....(((((((.((((((..((((....))))..)))))))))))))....))))))))))))))))....

Structure

---a       aacu         CCCU       U      ua    a 
    ccuaccu    gggUUAGGG    GGCUCCA CUCCuu  ggaa a
    |||||||    |||||||||    ||||||| ||||||  ||||  
    gggugga    cCCAAUCCC    UCGGGGU GAGggg  ucuu c
uguc       ----         AGCU       -      ug    c 

Annotation confidence High

Genome context

chr10: 63372957-63373048 [-]

Disease association

hsa-mir-1296 is associated with one or more human diseases in the Human microRNA Disease Database

Mature hsa-miR-1296-5p

• Accession: MIMAT0005794
• Description: Homo sapiens hsa-miR-1296-5p mature miRNA
• Sequence: 16 - UUAGGGCCCUGGCUCCAUCUCC - 37
• Evidence: experimental ; Illumina [2,4], 454 [3]

Mature hsa-miR-1296-3p

• Accession: MIMAT0026637
• Description: Homo sapiens hsa-miR-1296-3p mature miRNA
• Sequence: 59 - GAGUGGGGCUUCGACCCUAACC - 80
• Evidence: experimental ; Illumina [4]

References

1. PubMed ID: 16954537
   Many novel mammalian microRNA candidates identified by extensive cloning and RAKE analysis
   "Berezikov E, van Tetering G, Verheul M, van de Belt J, van Laake L, Vos J, Verloop R, van de Wetering M, Guryev V, Takada S, van Zonneveld AJ, Mano H, Plasterk R, Cuppen E"
   "Genome Res (2006) 16:1289-1298


2. PubMed ID: 18285502
   Application of massively parallel sequencing to microRNA profiling and discovery in human embryonic stem cells
   "Morin RD, O'Connor MD, Griffith M, Kuchenbauer F, Delaney A, Prabhu AL, Zhao Y, McDonald H, Zeng T, Hirst M, Eaves CJ, Marra MA"
   "Genome Res (2008) 18:610-621


3. PubMed ID: 19508715
   Identification and analysis of miRNAs in human breast cancer and teratoma samples using deep sequencing
   Nygaard S, Jacobsen A, Lindow M, Eriksen J, Balslev E, Flyger H, Tolstrup N, Møller S, Krogh A, Litman T
   BMC Med Genomics (2009) 2:35


4. PubMed ID: 23034410
   Birth and expression evolution of mammalian microRNA genes
   "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
   "Genome Res (2013) 23:34-45