Stem-loop hsa-mir-2113

Accession

MI0003939

Symbol

HGNC: MIR2113

Description

Homo sapiens hsa-mir-2113 precursor miRNA

Literature search

3 open access papers mention hsa-mir-2113
(4 sentences)

Sequence

31 reads, 2 reads per million, 3 experiments

uuuucaaagcaaugugugacagguacagggacaaaucccguuaauaaguaagaggAUUUGUGCUUGGCUCUGUCACaugccacuuugaaaa
.((((((((...(((((((((((..((((.((((((((..(((.....)))..)))))))).))))..)))))))))))...)))))))).

Structure

u        caa           ua    g        cg   a 
 uuucaaag   ugugugacagg  cagg acaaaucc  uua u
 ||||||||   |||||||||||  |||| ||||||||  ||| a
 aaaguuuc   guaCACUGUCU  GUUC UGUUUAgg  aau a
a        acc           CG    G        ag   g 

Annotation confidence Not enough data

Comments

This sequence was identified as a miRNA candidate by Berezikov et al. using RAKE and MPSS techniques [1]. Expression was later confirmed by qRT-PCR [2]. This sequence is named MID246 in [2].

Genome context

chr6: 98024531-98024621 [+]

Disease association

hsa-mir-2113 is associated with one or more human diseases in the Human microRNA Disease Database

Mature hsa-miR-2113

• Accession: MIMAT0009206
• Description: Homo sapiens hsa-miR-2113 mature miRNA
• Sequence: 56 - AUUUGUGCUUGGCUCUGUCAC - 76
• Evidence: experimental ; qRT-PCR [2]

References

1. PubMed ID: 19015728
   MicroRNA expression patterns and function in endodermal differentiation of human embryonic stem cells
   Tzur G, Levy A, Meiri E, Barad O, Spector Y, Bentwich Z, Mizrahi L, Katzenellenbogen M, Ben-Shushan E, Reubinoff BE, Galun E
   PLoS One (2008) 3:e3726


2. PubMed ID: 16954537
   Many novel mammalian microRNA candidates identified by extensive cloning and RAKE analysis
   "Berezikov E, van Tetering G, Verheul M, van de Belt J, van Laake L, Vos J, Verloop R, van de Wetering M, Guryev V, Takada S, van Zonneveld AJ, Mano H, Plasterk R, Cuppen E"
   "Genome Res (2006) 16:1289-1298