Stem-loop mmu-mir-802

Accession

MI0004249

Symbol

MGI: Mir802

Description

Mus musculus mmu-mir-802 precursor miRNA mir-802

Gene
family

RF00887; mir-802

Literature search

20 open access papers mention mmu-mir-802
(136 sentences)

Sequence

2895 reads, 29 reads per million, 31 experiments

gguccuauuauuugcaaUCAGUAACAAAGAUUCAUCCUUgugucaaucauacaacACGGAGAGUCUUUGUCACUCAGuguaauuaauagccuucacc
((..((((((.(((((...(((.((((((((((.(((((((((.....))))))...))))))))))))).)))...))))).))))))))......

Structure

------  uc      u     aUC   A          A   ---      c 
      gg  cuauua uugca   AGU ACAAAGAUUC UCC   UUgugu a
      ||  |||||| |||||   ||| |||||||||| |||   |||||| a
      cc  gauaau aaugu   UCA UGUUUCUGAG AGG   aacaua u
ccacuu  --      u     GAC   C          -   CAc      c 

Annotation confidence High

Genome context

chr16: 93369720-93369816 [+]

Mature mmu-miR-802-5p

• Accession: MIMAT0004188
• Description: Mus musculus mmu-miR-802-5p mature miRNA
• Sequence: 18 - UCAGUAACAAAGAUUCAUCCUU - 39
• Evidence: experimental ; miRAP-cloned [1], cloned [2], Illumina [3]

Mature mmu-miR-802-3p

• Accession: MIMAT0017240
• Description: Mus musculus mmu-miR-802-3p mature miRNA
• Sequence: 56 - ACGGAGAGUCUUUGUCACUCAG - 77
• Evidence: experimental ; Illumina [3]

References

1. PubMed ID: 17604727
   A mammalian microRNA expression atlas based on small RNA library sequencing
   "Landgraf P, Rusu M, Sheridan R, Sewer A, Iovino N, Aravin A, Pfeffer S, Rice A, Kamphorst AO, Landthaler M, Lin C, Socci ND, Hermida L, Fulci V, Chiaretti S, Foa R, Schliwka J, Fuchs U, Novosel A, Muller RU, Schermer B, Bissels U, Inman J, Phan Q, Chien M"
   "Cell (2007) 129:1401-1414


2. PubMed ID: 20413612
   Mammalian microRNAs: experimental evaluation of novel and previously annotated genes
   "Chiang HR, Schoenfeld LW, Ruby JG, Auyeung VC, Spies N, Baek D, Johnston WK, Russ C, Luo S, Babiarz JE, Blelloch R, Schroth GP, Nusbaum C, Bartel DP"
   "Genes Dev (2010) 24:992-1009


3. PubMed ID: 16973894
   Mouse microRNA profiles determined with a new and sensitive cloning method
   "Takada S, Berezikov E, Yamashita Y, Lagos-Quintana M, Kloosterman WP, Enomoto M, Hatanaka H, Fujiwara S, Watanabe H, Soda M, Choi YL, Plasterk RH, Cuppen E, Mano H"
   "Nucleic Acids Res (2006) 34:e115