Stem-loop mmu-mir-455

Accession

MI0004679

Symbol

MGI: Mir455

Description

Mus musculus mmu-mir-455 precursor miRNA mir-455

Gene
family

RF00709; mir-455

Literature search

179 open access papers mention mmu-mir-455
(774 sentences)

Sequence

136581 reads, 246.0 reads per million, 157 experiments

cucccuggugugagcgUAUGUGCCUUUGGACUACAUCGUgaacgcagcaccauGCAGUCCACGGGCAUAUACACUugccuca
.....(((.(((((.((((((((((.((((((.(((.(((.......))).))).)))))).)))))))))).))))).)))

Structure

cuccc   u     c          U      A   C   aa 
     ugg gugag gUAUGUGCCU UGGACU CAU GUg  c
     ||| ||||| |||||||||| |||||| ||| |||  g
     acu cguUC CAUAUACGGG ACCUGA Gua cac  c
-----   c     A          C      C   c   ga 

Annotation confidence High

Genome context

4: 63175088-63175169 [+]

Mature mmu-miR-455-5p

• Accession: MIMAT0003485
• Description: Mus musculus mmu-miR-455-5p mature miRNA
• Sequence: 17 - UAUGUGCCUUUGGACUACAUCGU - 39
• Evidence: experimental ; MPSS [1], miRAP-cloned [2], Illumina [4-5]

Mature mmu-miR-455-3p

• Accession: MIMAT0003742
• Description: Mus musculus mmu-miR-455-3p mature miRNA
• Sequence: 54 - GCAGUCCACGGGCAUAUACACU - 75
• Evidence: experimental ; MPSS [1], miRAP-cloned [2], cloned [3], Illumina [4-5]

References

1. PubMed ID: 17604727
   A mammalian microRNA expression atlas based on small RNA library sequencing
   "Landgraf P, Rusu M, Sheridan R, Sewer A, Iovino N, Aravin A, Pfeffer S, Rice A, Kamphorst AO, Landthaler M, Lin C, Socci ND, Hermida L, Fulci V, Chiaretti S, Foa R, Schliwka J, Fuchs U, Novosel A, Muller RU, Schermer B, Bissels U, Inman J, Phan Q, Chien M"
   "Cell (2007) 129:1401-1414


2. PubMed ID: 20215419
   MicroRNA transcriptome in the newborn mouse ovaries determined by massive parallel sequencing
   "Ahn HW, Morin RD, Zhao H, Harris RA, Coarfa C, Chen ZJ, Milosavljevic A, Marra MA, Rajkovic A"
   "Mol Hum Reprod (2010) 16:463-471


3. PubMed ID: 20413612
   Mammalian microRNAs: experimental evaluation of novel and previously annotated genes
   "Chiang HR, Schoenfeld LW, Ruby JG, Auyeung VC, Spies N, Baek D, Johnston WK, Russ C, Luo S, Babiarz JE, Blelloch R, Schroth GP, Nusbaum C, Bartel DP"
   "Genes Dev (2010) 24:992-1009


4. PubMed ID: 16582102
   The expression profile of microRNAs in mouse embryos
   "Mineno J, Okamoto S, Ando T, Sato M, Chono H, Izu H, Takayama M, Asada K, Mirochnitchenko O, Inouye M, Kato I"
   "Nucleic Acids Res (2006) 34:1765-1771


5. PubMed ID: 16973894
   Mouse microRNA profiles determined with a new and sensitive cloning method
   "Takada S, Berezikov E, Yamashita Y, Lagos-Quintana M, Kloosterman WP, Enomoto M, Hatanaka H, Fujiwara S, Watanabe H, Soda M, Choi YL, Plasterk RH, Cuppen E, Mano H"
   "Nucleic Acids Res (2006) 34:e115