Accession
MI0004714
Description
Physcomitrella patens
ppt-MIR1215 precursor miRNA
Sequence
5810
reads,
244.0
reads per million, 10 experiments
cgugaagguacuggagcUCAUUGCAAAACUGUAUACGAuccuuucaacuugaacagcauucgaaagcuuguggcuauugcucagaggaugGUAUACAGUUUCGCUGUGGAACUCcagucccuacaug
((((.(((.(((((((.((((.((.(((((((((((.((((((((((.....(((((........)).))).....)))...))))))).))))))))))).)).))))..))))))).))).))))
((((.(((.(((((((.((((.((.(((((((((((.((((((((((.....(((((........)).))).....)))...))))))).))))))))))).)).))))..))))))).))).))))
Structure
a u -c U A G --- cuuga - auu
cgug agg acuggag UCAU GC AAACUGUAUAC Auccuuu caa aca gc c
|||| ||| ||||||| |||| || ||||||||||| ||||||| ||| ||| ||
guac ucc ugacCUC GGUG CG UUUGACAUAUG uaggaga guu ugu cg g
a c AA U C g cuc aucgg u aaa
Annotation confidence
Medium
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Genome context
Chr17: 11853573-11853699 [+]
Database links
Mature ppt-miR1215-5p
| Accession | MIMAT0003904 |
| Description | Physcomitrella patens ppt-miR1215-5p mature miRNA |
| Sequence | 18 - UCAUUGCAAAACUGUAUACGA - 38 |
| Evidence |
experimental
Northern [1], 454 [2] |
Mature ppt-miR1215-3p
| Accession | MIMAT0053652 |
| Description | Physcomitrella patens ppt-miR1215-3p mature miRNA |
| Sequence | 91 - GUAUACAGUUUCGCUGUGGAACUC - 114 |
| Evidence |
experimental
unknown |
References
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