Accession
MI0004720
Description
Physcomitrella patens
ppt-MIR1219c precursor miRNA
Sequence
ggccuCUUCCUGCCUCUCACUAGCUUcaucccucagaagcugaaucuucucagggaaggagcuacugaagagcaggaauagauugcacucuuggacuccaaccaaucugucuuccauuauuuguguacucaaauucuucuguuguaguggcc
((((.((((((((.(((((.(((((((.(((((.(((((......))))).))))).))))))).)).)))))))))((((((((.....((((...)))).))))))))........(((((......)))))...........)).))))
((((.((((((((.(((((.(((((((.(((((.(((((......))))).))))).))))))).)).)))))))))((((((((.....((((...)))).))))))))........(((((......)))))...........)).))))
Structure
u -------------------------------------------------------------------- C - C a c cu
ggcc CU UCCUGC UCU CA UAGCUUc ucccu agaag g
|||| || |||||| ||| || ||||||| ||||| |||||
ccgg ga aggacg aga gu aucgagg aggga ucuuc a
u uguugucuucuuaaacucauguguuuauuaccuucugucuaaccaaccucagguucucacguuagaua - a c a c ua
Annotation confidence
Not enough data
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Genome context
Chr13: 16868122-16868273 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from ppt-MIR1219c
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature ppt-miR1219c
| Accession | MIMAT0003910 |
| Description | Physcomitrella patens ppt-miR1219c mature miRNA |
| Sequence | 6 - CUUCCUGCCUCUCACUAGCUU - 26 |
| Evidence |
experimental
Northern [1], 454 [2] |
References
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