Accession
MI0004726
Description
Physcomitrella patens
ppt-MIR1221 precursor miRNA
Sequence
aacugauggagaaacugccgUGGAUGGUGUGCAGGGUCAAAuacucuuuuggcuuucgauguguguuuuccgcuggcggcgguuugugucgaaguggugaccuuaguggguuggacacauaugaaucaggagcauuUGGCCCAUGCACAGUAUCUACGcaaguuccucggucugguu
(((((((.(((.((((..((((((((.(((((((((((((((.((((..(((..(((.((((((((((((((((((((.((.((((...)))).)).)).))..))))))..)))))))))))))))))))).))))))))).)))))).))))))))..)))).))).))).))))
(((((((.(((.((((..((((((((.(((((((((((((((.((((..(((..(((.((((((((((((((((((((.((.((((...)))).)).)).))..))))))..)))))))))))))))))))).))))))))).)))))).))))))))..)))).))).))).))))
Structure
- g a gc G - a uu cu g -- -- - g g u
aacu gau gag aacu cgUGGAUG UGUGCA GGGUCAAAu cucu ugg uuc auguguguuu uccgcu gg cg cg uuug
|||| ||| ||| |||| |||||||| |||||| ||||||||| |||| ||| ||| |||||||||| |||||| || || || |||| g
uugg cug cuc uuga GCAUCUAU ACACGU CCCGGUuua gagg acu aag uauacacagg ggguga cc gu gu aagc
u g c ac G A c -- -- - uu uu a g g u
Annotation confidence
Not enough data
Do you think this miRNA is real?
Genome context
Chr16: 6570760-6570936 [+]
Database links
Mature ppt-miR1221-5p
| Accession | MIMAT0003916 |
| Description | Physcomitrella patens ppt-miR1221-5p mature miRNA |
| Sequence | 21 - UGGAUGGUGUGCAGGGUCAAA - 41 |
| Evidence |
experimental
Northern [1], 454 [2] |
Mature ppt-miR1221-3p
| Accession | MIMAT0004834 |
| Description | Physcomitrella patens ppt-miR1221-3p mature miRNA |
| Sequence | 137 - UGGCCCAUGCACAGUAUCUACG - 158 |
| Evidence |
experimental
454 [2] |
References
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