Stem-loop dre-mir-190b

Accession

MI0004764

Description

Danio rerio dre-mir-190b precursor miRNA

Literature search

11 open access papers mention dre-mir-190b
(17 sentences)

Sequence

3794441 reads, 825.0 reads per million, 180 experiments

uguuacagacuaugUGAUAUGUUUGAUAUUCGGUUGcuuucuuuauaucaugucaACUAAAUAUCAGACAUAUUCCUauagacugugaca
((((((((.(((((.(((((((((((((((.((((((..............).))))).)))))))))))))))..))))).))))))))

Structure

        a     -U               C     - uuucuu 
uguuacag cuaug  GAUAUGUUUGAUAUU GGUUG c      u
|||||||| |||||  ||||||||||||||| ||||| |       
acaguguc gauaU  UUAUACAGACUAUAA UCAac g      a
        a     CC               A     u uacuau 

Annotation confidence High

Genome context

chr16: 17705898-17705987 [-]

Mature dre-miR-190b-5p

• Accession: MIMAT0003747
• Description: Danio rerio dre-miR-190b-5p mature miRNA
• Sequence: 15 - UGAUAUGUUUGAUAUUCGGUUG - 36
• Evidence: experimental ; cloned [1], Northern [1]

Mature dre-miR-190b-3p

• Accession: MIMAT0052787
• Description: Danio rerio dre-miR-190b-3p mature miRNA
• Sequence: 56 - ACUAAAUAUCAGACAUAUUCCU - 77
• Evidence: experimental ; cloned [1], Northern [1]

References

1. PubMed ID: 16698962
   Cloning and expression of new microRNAs from zebrafish
   "Kloosterman WP, Steiner FA, Berezikov E, de Bruijn E, van de Belt J, Verheul M, Cuppen E, Plasterk RH"
   "Nucleic Acids Res (2006) 34:2558-2569