Stem-loop dre-mir-724-1

Accession

MI0004768

Description

Danio rerio dre-mir-724-1 precursor miRNA mir-724

Gene
family

RF03456; mir-724

Literature search

5 open access papers mention dre-mir-724-1
(11 sentences)

Sequence

1397566 reads, 1064.0 reads per million, 270 experiments

cagcagacuggauUUAAAGGGAAUUUGCGACUGUUAgucagauuuguagaACAGCCACACCUUCCUUUUAAGaucuugccugcug
((((((.(.((((((((((((((..((.(.(((((...((....))...))))).).))..)))))))).)))))).).))))))

Structure

      a u      -        UU  C A     Agu  g 
cagcag c ggauUU AAAGGGAA  UG G CUGUU   ca a
|||||| | |||||| ||||||||  || | |||||   ||  
gucguc g ucuaGA UUUUCCUU  AC C GACAa   gu u
      c u      A        CC  A C     gau  u 

Annotation confidence High

Genome context

chr11: 3176686-3176770 [+]

Mature dre-miR-724-5p

• Accession: MIMAT0003752
• Description: Danio rerio dre-miR-724-5p mature miRNA
• Sequence: 14 - UUAAAGGGAAUUUGCGACUGUUA - 36
• Evidence: experimental ; cloned [1], Northern [1]

Mature dre-miR-724-3p

• Accession: MIMAT0052789
• Description: Danio rerio dre-miR-724-3p mature miRNA
• Sequence: 51 - ACAGCCACACCUUCCUUUUAAG - 72
• Evidence: experimental ; cloned [1], Northern [1]

References

1. PubMed ID: 16698962
   Cloning and expression of new microRNAs from zebrafish
   "Kloosterman WP, Steiner FA, Berezikov E, de Bruijn E, van de Belt J, Verheul M, Cuppen E, Plasterk RH"
   "Nucleic Acids Res (2006) 34:2558-2569