Stem-loop dre-mir-725

Accession

MI0004769

Description

Danio rerio dre-mir-725 precursor miRNA mir-725

Gene
family

RF03884; mir-725

Literature search

4 open access papers mention dre-mir-725
(7 sentences)

Sequence

41311 reads, 2330 reads per million, 11 experiments

cugcagugcacauUGCUAGGAAUGGUGGCUGAGAUgaagagcaggauUUCAGUCAUUGUUUCUAGUAGUgcgcgcugcag
(((((((((.(((((((((((((((((((((((((..........))))))))))))))))))))))))).)))))))))

Structure

         a                         gaag 
cugcagugc cauUGCUAGGAAUGGUGGCUGAGAU    a
||||||||| |||||||||||||||||||||||||     
gacgucgcg gUGAUGAUCUUUGUUACUGACUUua    g
         c                         ggac 

Annotation confidence Medium

Genome context

chr22: 24366193-24366272 [-]

Mature dre-miR-725-3p

• Accession: MIMAT0003753
• Description: Danio rerio dre-miR-725-3p mature miRNA
• Sequence: 48 - UUCAGUCAUUGUUUCUAGUAGU - 69
• Evidence: experimental ; cloned [1], Northern [1]

Mature dre-miR-725-5p

• Accession: MIMAT0032010
• Description: Danio rerio dre-miR-725-5p mature miRNA
• Sequence: 14 - UGCUAGGAAUGGUGGCUGAGAU - 35
• Evidence: not_experimental

References

1. PubMed ID: 16698962
   Cloning and expression of new microRNAs from zebrafish
   "Kloosterman WP, Steiner FA, Berezikov E, de Bruijn E, van de Belt J, Verheul M, Cuppen E, Plasterk RH"
   "Nucleic Acids Res (2006) 34:2558-2569