Stem-loop dre-mir-730

Accession

MI0004775

Description

Danio rerio dre-mir-730 precursor miRNA mir-460

Gene
family

RF00712; mir-460

Literature search

1 open access papers mention dre-mir-730
(4 sentences)

Sequence

213358 reads, 77.0 reads per million, 238 experiments

ggguucuccggucUCCUCAUUGUGCAUGCUGUGUGUcuucagucugguccuCACAGCGCCUGCAAUGUGGAGgcuaggggacuc
((((((((.(((((((.((((((...(((((((.(.((.......)).)..)))))))...)))))).))))))).))))))))

Structure

        c       U      GCA       -U U  uc 
ggguucuc ggucUCC CAUUGU   UGCUGUG  G cu  a
|||||||| ||||||| ||||||   |||||||  | ||  g
cucagggg ucgGAGG GUAACG   GCGACAC  c gg  u
        a       U      UCC       uc u  uc 

Annotation confidence High

Genome context

chr7: 23362162-23362245 [+]

Mature dre-miR-730-5p

• Accession: MIMAT0003760
• Description: Danio rerio dre-miR-730-5p mature miRNA
• Sequence: 14 - UCCUCAUUGUGCAUGCUGUGUGU - 36
• Evidence: experimental ; cloned [1], Northern [1]

Mature dre-miR-730-3p

• Accession: MIMAT0060903
• Description: Danio rerio dre-miR-730-3p mature miRNA
• Sequence: 52 - CACAGCGCCUGCAAUGUGGAG - 72
• Evidence: experimental ; cloned [1], Northern [1]

References

1. PubMed ID: 16698962
   Cloning and expression of new microRNAs from zebrafish
   "Kloosterman WP, Steiner FA, Berezikov E, de Bruijn E, van de Belt J, Verheul M, Cuppen E, Plasterk RH"
   "Nucleic Acids Res (2006) 34:2558-2569