Stem-loop dre-mir-733

Accession

MI0004778

Description

Danio rerio dre-mir-733 precursor miRNA

Literature search

1 open access papers mention dre-mir-733
(1 sentences)

Sequence

426 reads, 30 reads per million, 11 experiments

uggcuuuuccguagugucgcuguUGCGUUGGUUUAGCUCAGUGGUUacuucugugaucccugaaaaaucaaccuuucauggucaccucggugcca
((((....(((..(((.(..((....((((((((...((((.((((((....)))))).)))).))))))))....))..).)))..))).))))

Structure

    uuuu   ua   u gc  uUGC        AGC    U      u 
uggc    ccg  gug c  ug    GUUGGUUU   UCAG GGUUac u
||||    |||  ||| |  ||    ||||||||   |||| ||||||  
accg    ggc  cac g  ac    caacuaaa   aguc cuagug c
    ---u   uc   u gu  uuuc        --a    c      u 

Annotation confidence Low

Genome context

chr14: 2406978-2407072 [-]

Mature dre-miR-733

• Accession: MIMAT0003763
• Description: Danio rerio dre-miR-733 mature miRNA
• Sequence: 24 - UGCGUUGGUUUAGCUCAGUGGUU - 46
• Evidence: experimental ; cloned [1], in-situ [1], Northern [1]

References

1. PubMed ID: 16698962
   Cloning and expression of new microRNAs from zebrafish
   "Kloosterman WP, Steiner FA, Berezikov E, de Bruijn E, van de Belt J, Verheul M, Cuppen E, Plasterk RH"
   "Nucleic Acids Res (2006) 34:2558-2569