Stem-loop dre-mir-734

Accession

MI0004780

Description

Danio rerio dre-mir-734 precursor miRNA mir-734

Gene
family

RF03571; mir-734

Literature search

2 open access papers mention dre-mir-734
(2 sentences)

Sequence

83994 reads, 93.0 reads per million, 214 experiments

ugauauugagagcuGAACCAUUCUGCAGCAUGGCUGCcuguggauccucuggggaaaggUAAAUGCUGCAGAAUCGUACCguucuugguauca
(((((((((((((.(.((.((((((((((((...(((((.....(((...)))...))))).)))))))))))).)).).)))))))))))))

Structure

             u A  C            GGC     gugga   u 
ugauauugagagc G AC AUUCUGCAGCAU   UGCcu     ucc  
||||||||||||| | || ||||||||||||   |||||     ||| c
acuaugguucuug C UG UAAGACGUCGUA   AUgga     ggg  
             C A  C            --A     --aag   u 

Annotation confidence High

Genome context

chr1: 34122880-34122972 [+]

Mature dre-miR-734-5p

• Accession: MIMAT0052795
• Description: Danio rerio dre-miR-734-5p mature miRNA
• Sequence: 15 - GAACCAUUCUGCAGCAUGGCUGC - 37
• Evidence: experimental ; cloned [1], Northern [1]

Mature dre-miR-734-3p

• Accession: MIMAT0003765
• Description: Danio rerio dre-miR-734-3p mature miRNA
• Sequence: 60 - UAAAUGCUGCAGAAUCGUACC - 80
• Evidence: experimental ; cloned [1], Northern [1]

References

1. PubMed ID: 16698962
   Cloning and expression of new microRNAs from zebrafish
   "Kloosterman WP, Steiner FA, Berezikov E, de Bruijn E, van de Belt J, Verheul M, Cuppen E, Plasterk RH"
   "Nucleic Acids Res (2006) 34:2558-2569