Stem-loop dre-mir-737

Accession

MI0004783

Description

Danio rerio dre-mir-737 precursor miRNA mir-737

Gene
family

RF03956; mir-737

Literature search

1 open access papers mention dre-mir-737
(1 sentences)

Sequence

3195 reads, 201 reads per million, 11 experiments

ccacagcugcugugcuguuGUUUUUUUAGGUUUUGAUUUUugugaaaugucgaugagaaAAUCAAAACCUAAAGAAAAUAcugcgcagauagaugg
...((.(((((((((.((..(((((((((((((((((((((...............)))))))))))))))))))))..)).)))))).))).)).

Structure

cca  g   -      u  uG                     gugaaa 
   ca cug cugugc gu  UUUUUUUAGGUUUUGAUUUUu      u
   || ||| |||||| ||  |||||||||||||||||||||      g
   gu gau gacgcg cA  AAAGAAAUCCAAAACUAAaag      u
--g  a   a      u  UA                     aguagc 

Annotation confidence Medium

Genome context

chr18: 45962897-45962992 [+]

Mature dre-miR-737-3p

• Accession: MIMAT0003768
• Description: Danio rerio dre-miR-737-3p mature miRNA
• Sequence: 60 - AAUCAAAACCUAAAGAAAAUA - 80
• Evidence: experimental ; cloned [1], Northern [1]

Mature dre-miR-737-5p

• Accession: MIMAT0032013
• Description: Danio rerio dre-miR-737-5p mature miRNA
• Sequence: 20 - GUUUUUUUAGGUUUUGAUUUU - 40
• Evidence: not_experimental

References

1. PubMed ID: 16698962
   Cloning and expression of new microRNAs from zebrafish
   "Kloosterman WP, Steiner FA, Berezikov E, de Bruijn E, van de Belt J, Verheul M, Cuppen E, Plasterk RH"
   "Nucleic Acids Res (2006) 34:2558-2569