miRBase entry: xtr-mir-106

Stem-loop xtr-mir-106


Accession
MI0004822
Description
Xenopus tropicalis xtr-mir-106 precursor miRNA


Sequence

2537 reads, 345.0 reads per million, 4 experiments
ugcAAAAGUGCUUAUAGUGCAGGUAGAauuuaaaccuacugcaccauaagcacuuccugcauc
((((.((((((((((.((((((.(((.........))))))))).))))))))))..))))..

Structure
--    -A          A      G   Aau 
  ugcA  AAGUGCUUAU GUGCAG UAG   u
  ||||  |||||||||| |||||| |||   u
  acgu  uucacgaaua cacguc auc   a
cu    cc          c      -   caa 


Annotation confidence Not enough data
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Genome context
8: 68370627-68370689 [-]
Clustered miRNAs
5 other miRNAs are < 10 kb from xtr-mir-106
Name Accession Chromosome Start End Strand Confidence




Database links

Mature xtr-miR-106-5p

Accession MIMAT0003583
Description Xenopus tropicalis xtr-miR-106-5p mature miRNA
Sequence 4 - AAAAGUGCUUAUAGUGCAGGUAGA - 27
Evidence not_experimental

References