Stem-loop xtr-mir-182

Accession

MI0004851

Description

Xenopus tropicalis xtr-mir-182 precursor miRNA

Sequence

aguggcuucucuggcagugUUUGGCAAUGGUAGAACUCACAcuggugagcuaugaagauccggUGGUUCUAGACUUGCCAACUAuggccugggaauaaagcagca
.((.(((((((.(((.(((.(((((((...((((((...((((((....((....))..))))))))))))...))))))).))).))).))))....))).)).

Structure

a  g   ----    u   a   U       UGG      UCA      ugag  a 
 gu gcu    ucuc ggc gug UUGGCAA   UAGAAC   CAcugg    cu u
 || |||    |||| ||| ||| |||||||   ||||||   ||||||    ||  
 cg cga    aggg ccg uAU AACCGUU   AUCUUG   GUggcc    ga g
a  a   aaua    u   g   C       CAG      ---      --ua  a 

Annotation confidence Not enough data

Genome context

chr3: 77404446-77404550 [+]

Clustered miRNAs

2 other miRNAs are < 10 kb from xtr-mir-182

Mature xtr-miR-182-5p

• Accession: MIMAT0003610
• Description: Xenopus tropicalis xtr-miR-182-5p mature miRNA
• Sequence: 20 - UUUGGCAAUGGUAGAACUCACA - 41
• Evidence: not_experimental

Mature xtr-miR-182-3p

• Accession: MIMAT0003611
• Description: Xenopus tropicalis xtr-miR-182-3p mature miRNA
• Sequence: 64 - UGGUUCUAGACUUGCCAACUA - 84
• Evidence: not_experimental

References